This week I was out refining a zero on an AR. It has Aimpoint Comp M5. I also mounted Aimpoint 3x-c magnifier behind it. With the dot only, I was getting hits on steel at 100 yards. With a magnifier, the dot shifted about half an IPSC width to the right and I was missing the steel.
How common are magnifier zero shifts? I tried adjusting the windage screw on the magnifier but didn't feel like continuing and removed it.
Is this a common occurrence? Should the rifle be zeroed with a magnifier in place instead?